Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916365.1_cds_XP_016466071.1_58964
CDS Infomation

[gene=LOC107788854] [db_xref=GeneID:107788854] [protein=pentatricopeptide repeat-containing protein At2g36730-like] [protein_id=XP_016466071.1] [location=join(41392..41930,43422..44250)] [gbkey=CDS]
Sequence

ATGATTTCCCACCAAATTGAGGCACTTTTCCAACGGTCTAAAACGACTCTTCATCTTCTC
CAACTTCATTCTCTAATAATCAAAATAGCTCTTGATCACGACGAATATCGTCTTTCCCAG
TTCATATCCTTCTCATCTTCAATATCTCTCCAATTCTGTCGCACAATCTTCGATAGTTCT
CCAATTACTCCACCAATCTTCGCTTGGAACACACTGATGAGAGAATATTCAAAAAGCTCC
ACGAAAATTGAGTCCGTGAAGCTCTTTAATCAGCTTCAAAGAACGGAATTAAAGCCAGAT
AAATTCACATTACCTATTGTGCTAAAATCTTGTGGGCATTGTTTGATGATTGGAACTGGT
GGGTCGTTGCATTCAATGGCTTTCAAGTCCGGTTTCAGTTCGGACATACATGTGAGCAAT
ACCCTAATGAGAATGTATGCAGTATTTGGTGCGATCGGGTATGCTCGGCGACTGTTTGAT
GAAATGCTTGAGAGGGATATAGTTTCTTGGAGTTCTATGATAGCCGCTTATGTTCATTGT
AACCTGCCTTCAGATGCTCTGCTCCTGTTTCAAAGCATGAAGCTAGCAAATGAACAGCCA
AATTCCATCACTTTGGTCAGCTTGCTTGGAGCATGTACTCATGTCCTGAATATCAGATTA
GGTAGATGTATTCACTCACACATTGTCACCAGTGGTATTGAACTACATGTTGAACTGGAA
ACAGCCCTCCTGGGAATGTATGCAAAATGCGGGCATATAGAGCAGGCTTTCCACATCTTC
AATTCAATGGCTGATAAAAATCTGCAGACCTGGACCATCATGATTTCTGGCCTTGCCGAT
AATGGTCATGGAGAAGAAGCTGTATCCTTGTTTACCAGCATGGAAGAAGCTGGCTTTAGA
CCGGACAGCTTGTCATTTTCTGTGATTCTATGTGCTTGTAGTCATAAAGGACTTGTTGAT
GTGGGTCGTAGATATTTTCATAAAATGGTAAGTATTTATAACATCAGGCCAACTATGGAA
CACTATGGATGCATGGTGGACATGTTTGGACGTGCTGGAGAATTAGAAGAAGCTTATGAT
CTTATAAAGAGCATGCCTATAGAGCCCAATTCTGTGATACTGAGGAGTTTCATTAGTGCT
TGTAAGCATCATGGTATTCCTTGTGCAAACGAAAATATAAGAGATATTCTGCTCAAAGTA
GAGCCTGAACTCGGATCAAACTATGTACTTGCTTCCAGTTTGTCTTTTCTTTTTAATTGC
AATGATGCCAACAGCCTAAGATCGGCGATGAAAGAGAAAGGAGTAAAGAAACTTCCTGGT
AGTAGTTGGGTGCAGCCGCTTGGTGGTTCTTCAGAGGACAGCATTTGA

Peptide Sequence

PEP ID

XP_016466071.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g36730-like [Nicotiana tabacum]
Sequence

MISHQIEALFQRSKTTLHLLQLHSLIIKIALDHDEYRLSQFISFSSSISLQFCRTIFDSS
PITPPIFAWNTLMREYSKSSTKIESVKLFNQLQRTELKPDKFTLPIVLKSCGHCLMIGTG
GSLHSMAFKSGFSSDIHVSNTLMRMYAVFGAIGYARRLFDEMLERDIVSWSSMIAAYVHC
NLPSDALLLFQSMKLANEQPNSITLVSLLGACTHVLNIRLGRCIHSHIVTSGIELHVELE
TALLGMYAKCGHIEQAFHIFNSMADKNLQTWTIMISGLADNGHGEEAVSLFTSMEEAGFR
PDSLSFSVILCACSHKGLVDVGRRYFHKMVSIYNIRPTMEHYGCMVDMFGRAGELEEAYD
LIKSMPIEPNSVILRSFISACKHHGIPCANENIRDILLKVEPELGSNYVLASSLSFLFNC
NDANSLRSAMKEKGVKKLPGSSWVQPLGGSSEDSI

Transcript Sequence

Gene sequence data has not been registered.